| Probeset ID
| AF203339.1_at
| Current gene ID
| AGAP006911
(AGAP006911 is also associated with: AF203339.1_s_at Ag.2L.14.0_CDS_at)
| Affymetrix transcript data
| AF203339.1 /DEF=Anopheles gambiae immune-responsive serpin-related protein ISerpF1 (ISerpF1) mRNA, partial cds. /DB_XREF=gi:6635470
| | |
| STAGE
| SIGNAL MEAN
| STD DEV
| L
| 1818.57
| 441.76
| M
| 1983.93
| 304.49
| NBF
| 1114.27
| 47.06
| BF3h
| 3155.87
| 359.77
| BF24h
| 1490.13
| 87.32
| BF48h
| 1557.5
| 113.21
| BF72h
| 1507.5
| 497.63
| BF96h
| 1649.37
| 79.94
| BF15d
| 3225.83
| 425.02
| | | | | | | | | | |
|
| TISSUE
| SIGNAL MEAN
| STD DEV
| Fat bodies
| 3417.37
| 467.07
| Midgut
| 92.1
| 25.1
| Ovaries
| 2145.47
| 838.44
| | | |
|
| 
|
AFFYMETRIX ANNOTATION
| Probeset ID
| AF203339.1_at
| Annotation Date
| 3/8/2007
| UniGene ID
| Aga.3316
| Genome Version
| February 2003 (IAGP v.MOZ2)
| Alignments
| chr2L:39329357-39329810 (+) // 96.79 //
| Gene Title
| Serpin 2 (SRPN2)
| SwissProt
| Q005N3 /// Q9U451
| Gene Ontology Molecular Function
| 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation
| InterPro
| IPR000215 // Proteinase inhibitor I4, serpin // 2.1E-25
| Annotation Description
| This probe set was annotated using the Matching Probes based pipeline to a UniGene identifier using 1 transcripts. // false // Matching Probes // A
| Annotation Transcript Cluster
| AF203339(11)
| Transcript Assignments
| AF203339 // Anopheles gambiae immune-responsive serpin-related protein ISerpF1 (ISerpF1) mRNA, partial cds. // gb // 11 // ---
| Annotation Notes
| ENSANGESTT00000002961 // ensembl_est // 7 // Cross Hyb Matching Probes /// ENSANGESTT00000002962 // ensembl_est // 7 // Cross Hyb Matching Probes /// BX027146 // gb // 7 // Cross Hyb Matching Probes /// BX068704 // gb // 7 // Cross Hyb Matching Probes ///
| | | | | | | | | | | | | |
ANOXCEL ANNOTATION
| Seq name
| AGAP006911-PA
| First residue
| M
| Description
| pep:known chromosome:AgamP3:2L:39896875:39899752:1 gene:AGAP006911 transcript:AGAP006911-RA
| CDS name and link to nucleotide data
| AGAP006911-RA
| Description
| cdna:known chromosome:AgamP3:2L:39896875:39899752:1 gene:AGAP006911
| Best match to AG-CDS
| AGAP006911-RA
| E value
| 0
| Score
| 820
| Extent of match
| 409
| Length of best match
| 1541
| % identity
| 100
| % Match length
| 27
| First residue of match - UTR overhang
| 212
| First residue of sequence
| 1
| Link to whole gene + 2000nt 5' + 200nt 3'
| AGAP006911-PA
| Link to 5' 2,000 nt
| AGAP006911-PA
| Link to 3' 200 nt
| AGAP006911-PA
| Gene name and view at Ensembl
| AGAP006911
| Protein view at Ensembl
| AGAP006911-PA
| Chromosome
| 2L
| For or Rev
| F
| Location
| join(39897086..39897116,39898248..39898345,39898414..39899226,39899294..39899444,39899516..39899652)
| Exon locations
| 39897086-39897116 39898248-39898345 39898414-39899226 39899294-39899444 39899516-39899652
| Number of introns and link to fasta file
| 4
| intron lengths
| 1132 69 68 72
| Start
| 39897086
| End
| 39899652
| Gene length
| 2566
| Protein size
| 409
| Complexity index
| 0.27
| Cys number
| 1
| SigP Result
| SIG
| Cleavage Position
| 21-22
| MW
| 46.557
| pI
| 5.21
| Mature MW
| 44.296
| pI
| 5.2
| TMHMM result
| ExpAA=1.96 First60=1.88 PredHel=0 Topology=o
| Predicted helices
| 0
| Best match to NR protein database
| serpin 2
| E value
| 0.0
| Match
| gi|116041593
| Score
| 817
| Extent of match
| 409
| Length of best match
| 409
| % identity
| 99
| % Match length
| 100
| First residue of match
| 1
| First residue of sequence
| 1
| Number of segments
| 1
| Species
| Anopheles gambiae
| Key words
| SERPIN 2 ANOPHELES GAMBIAE SERINE PROTEASE INHIBITOR AEDES AEGYPTI IMMUNE-RESPONSIVE SERPIN-RELATED ISERPF1 IMMUNE RESPONSIVE RELATED 27A GLOSSINA MORSITANS DROSOPHILA PSEUDOOBSCURA >GI SERPIN-27A MELANOGASTER SALIVARY LUTZOMYIA LONGIPALPIS 1 3 PXSERPIN PLUTELLA XYLOSTELLA BOMBYX MORI 3A MANDUCA SEXTA SIMILAR TO MELLIFERA TRIBOLIUM CASTANEUM HYPHANTRIA CUNEA ANTITHROMBIN III MACACA MULATTA OR CYSTEINE PROTEINASE CLADE C MEMBER MUS MUSCULUS ANT3_MOUSE ANTITHROMBIN-III PRECURSOR ATIII MOUSE AT-III SP. PEPTIDASE UNNAMED PRODUCT ANT3_PONPY HYPOTHETICAL PONGO PYGMAEUS ISOFORM PAN TROGLODYTES RATTUS NORVEGICUS
| Best match to SWISSP database
| Antithrombin-III precursor (ATIII) - Mus musculus (Mouse)
| E value
| 2E-048
| Match
| P32261|ANT3_MOUSE
| Score
| 192
| Extent of match
| 370
| Length of best match
| 465
| % identity
| 32
| % Match length
| 80
| First residue of match
| 103
| First residue of sequence
| 47
| Number of segments
| 1
| PROSITE motifs
| ASN_GLYCOSYLATION |PKC_PHOSPHO_SITE |CK2_PHOSPHO_SITE |MYRISTYL |MICROBODIES_CTER |SERPIN |
| Non promiscuous prosite motifs
| SERPIN |
| Best match to GO database
| serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 - Mus musculus - extracellular space
| E value
| E-4
| Function descriptors
| serine-type endopeptidase inhibitor activity||endopeptidase inhibitor activity||protease inhibitor activity||enzyme inhibitor activity||enzyme regulator activity
| Function parent
| enzyme regulator activity
| Function second parent
| enzyme inhibitor activity
| GO #
| GO:0004867
| E value of functional GO
| 3e-32
| Component descriptors
| cellular_component
| Component parent
| cellular_component
| GO #
| GO:0005575
| E value of component GO
| 3e-32
| Process descriptors
| biological_process
| Process parent
| enzyme regulator activity
| Process second parent
| enzyme inhibitor activity
| GO #
| GO:0008150
| E value of process GO
| 3e-32
| Best match to KOG database
| Serpin
| E value
| 8E-067
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