| Probeset ID
| AY137766.1_s_at
| Current gene ID
| AGAP004583
| Affymetrix transcript data
| AY137766.1 /DEF=Anopheles gambiae heat shock protein 70 mRNA, partial cds. /DB_XREF=gi:22296827
| | |
| STAGE
| SIGNAL MEAN
| STD DEV
| L
| 318.73
| 80.19
| M
| 68.2
| 48.4
| NBF
| 118.7
| 40.09
| BF3h
| 126.6
| 29.26
| BF24h
| 242.1
| 77.3
| BF48h
| 137.93
| 25.77
| BF72h
| 114.7
| 6.04
| BF96h
| 115.07
| 49.54
| BF15d
| 1874.33
| 605.46
| | | | | | | | | | |
|
| TISSUE
| SIGNAL MEAN
| STD DEV
| Fat bodies
| 140.03
| 34.42
| Midgut
| 179.9
| 199.26
| Ovaries
| 348.53
| 57.62
| | | |
|
| 
|
AFFYMETRIX ANNOTATION
| Probeset ID
| AY137766.1_s_at
| Annotation Date
| 3/8/2007
| Genome Version
| February 2003 (IAGP v.MOZ2)
| Alignments
| chr2R:59774402-59774634 (-) // 97.44 //
| Ensembl
| ENSANGG00000001248
| SwissProt
| Q8MQH5
| Gene Ontology Biological Process
| 0006457 // protein folding // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from electronic annotation
| Gene Ontology Molecular Function
| 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation
| InterPro
| IPR013126 // Heat shock protein 70 // 2.7E-54
| Annotation Description
| This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A
| Annotation Transcript Cluster
| XM_557504(11)
| Transcript Assignments
| AY137766 // Anopheles gambiae heat shock protein 70 mRNA, partial cds. // gb // 11 // --- /// SNAP_ANOPHELES00000001911 // cdna:SNAP chromosome:AgamP3:2R:57973501:57979236:-1 // ensembl_prediction // 11 // --- /// ENSANGT00000001468 // cdna:known chromoso
| Annotation Notes
| SNAP_ANOPHELES00000003752 // ensembl_prediction // 4 // Cross Hyb Matching Probes /// ENSANGT00000027681 // ensembl_transcript // 4 // Cross Hyb Matching Probes
| | | | | | | | | | | | | |
ANOXCEL ANNOTATION
| Seq name
| AGAP004583-PA
| First residue
| I
| Description
| pep:novel chromosome:AgamP3:2R:57978368:57978697:1 gene:AGAP004583 transcript:AGAP004583-RA
| CDS name and link to nucleotide data
| AGAP004583-RA
| Description
| cdna:novel chromosome:AgamP3:2R:57978368:57978697:1 gene:AGAP004583
| Stop?
| *
| Best match to AG-CDS
| AGAP004583-RA
| E value
| 2e-56
| Score
| 212
| Extent of match
| 109
| Length of best match
| 330
| % identity
| 100
| % Match length
| 33
| First residue of match - UTR overhang
| 1
| First residue of sequence
| 1
| Link to whole gene + 2000nt 5' + 200nt 3'
| AGAP004583-PA
| Link to 5' 2,000 nt
| AGAP004583-PA
| Link to 3' 200 nt
| AGAP004583-PA
| Gene name and view at Ensembl
| AGAP004583
| Protein view at Ensembl
| AGAP004583-PA
| Chromosome
| 2R
| For or Rev
| F
| Location
| 57978368..57978697
| Exon locations
| 57978368-57978697
| Number of introns and link to fasta file
| 0
| intron lengths
| 0
| Start
| 57978368
| End
| 57978697
| Gene length
| 329
| Protein size
| 109
| Complexity index
| 0.5
| Cys number
| 1
| SigP Result
| CYT
| MW
| 12.11
| pI
| 11.94
| TMHMM result
| ExpAA=0.00 First60=0.00 PredHel=0 Topology=o
| Predicted helices
| 0
| Best match to NR protein database
| unnamed protein product
| E value
| 3E-027
| Match
| gi|74140978
| Score
| 123
| Extent of match
| 102
| Length of best match
| 101
| % identity
| 68
| % Match length
| 101
| First residue of match
| 1
| First residue of sequence
| 1
| Number of segments
| 1
| Species
| Mus musculus
| Key words
| UNNAMED PRODUCT MUS MUSCULUS SPLICED CELL CYCLE-REGULATED FRAGMENT CANDIDA ALBICANS POTENTIAL CYCLE REGULATED HYPOTHETICAL DDBDRAFT_0204322 DICTYOSTELIUM DISCOIDEUM AX4 >GI KINASE N3 ISOFORM CRA_A YARROWIA LIPOLYTICA CLIB122 PKN3_MOUSE SERINE THREONINE-PROTEIN PKN-BETA PROTEIN-KINASE C-RELATED 3 CRA_B THREONINE PKN BETA C RELATED AFR092WP ASHBYA GOSSYPII ATCC ORYZA SATIVA JAPONICA CULTIVAR-GROUP CULTIVAR GROUP USTILAGO MAYDIS 521 MOTIF FAMILY EXPRESSED CAENORHABDITIS BRIGGSAE
| Best match to SWISSP database
| Serine/threonine-protein kinase N3 (EC 2.7.11.13) (Protein kinase PKN-beta)
| E value
| 0.26
| Match
| Q8K045|PKN3_MOUSE
| Score
| 33.1
| Extent of match
| 111
| Length of best match
| 878
| % identity
| 27
| % Match length
| 13
| First residue of match
| 404
| First residue of sequence
| 6
| Number of segments
| 1
| PROSITE motifs
| ASN_GLYCOSYLATION |CAMP_PHOSPHO_SITE |PKC_PHOSPHO_SITE |CK2_PHOSPHO_SITE |MICROBODIES_CTER |
| Best match to GO database
|
| E value
|
| Function descriptors
|
| Component descriptors
|
| Process descriptors
|
| Best match to KOG database
| Checkpoint 9-1-1 compl
| E value
| 0.26
| General class
| Energy production and conversion, Replication, recombination and repair
| Best match to SMART database
| SNc
| E value
| 0.49
| Best match to AEGY-PEP database
| conserved hypothetical protein
| E value
| 0.3
| Match
| AAEL003566-RA
| Score
| 29.3
| Extent of match
| 74
| Length of best match
| 480
| % identity
| 28
| % Match length
| 15
| First residue of match
| 330
| First residue of sequence
| 38
| Number of segments
| 1
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