| Probeset ID
| Ag.2L.101.0_CDS_at
| Current gene ID
| AGAP006167
| Affymetrix transcript data
| ENSANGT00000023879 /FEA=ENS /TIER=CDS /GEN=GPROR6 /ANNOT=ENSANGT00000023879 /EVID_CNT=1 /EVID_TYPE=ENS /GENE_CLUSTER=AffxAg.101 /SEG=chr2L:+26910475,26912441
| | |
| STAGE
| SIGNAL MEAN
| STD DEV
| L
| 66.53
| 18.81
| M
| 42.27
| 39.52
| NBF
| 45.63
| 21.05
| BF3h
| 184.93
| 74.56
| BF24h
| 78.8
| 33.15
| BF48h
| 102.63
| 40.18
| BF72h
| 72.57
| 10.78
| BF96h
| 33
| 23.21
| BF15d
| 82.23
| 18.98
| | | | | | | | | | |
|
| TISSUE
| SIGNAL MEAN
| STD DEV
| Fat bodies
| 113.97
| 60.78
| Midgut
| 110.1
| 58.18
| Ovaries
| 73.5
| 17.75
| | | |
|
| 
|
AFFYMETRIX ANNOTATION
| Probeset ID
| Ag.2L.101.0_CDS_at
| Annotation Date
| 3/8/2007
| Target Description
| ens:ENSANGT00000023879 /FEA=ENS /TIER=CDS /GEN=GPROR6 /ANNOT=ens:ENSANGT00000023879 /EVID_CNT=1 /EVID_TYPE=ENS /GENE_CLUSTER=AffxAg.101 /SEG=chr2L:+26910475,26912441
| Genome Version
| February 2003 (IAGP v.MOZ2)
| Alignments
| chr2L:26910475-26912441 (+) // 100.0 //
| Ensembl
| ENSANGG00000021273
| InterPro
| IPR013604 // 7TM chemoreceptor // 2.8E-5
| Trans Membrane
| ENSANGESTP00000000521 // span:42-61,138-160,195-217,282-304 // numtm:4 /// ENSANGP00000024742 // span:42-61,138-160,195-217,282-304 // numtm:4 /// SNAP_ANOPHELES00000009126 // span:42-61,138-160,195-217,277-299,303-325 // numtm:5
| Annotation Description
| This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A
| Annotation Transcript Cluster
| XM_316227(11)
| Transcript Assignments
| ENSANGESTT00000000521 // --- // ensembl_est // 11 // --- /// SNAP_ANOPHELES00000009126 // cdna:SNAP chromosome:AgamP3:2L:27479714:27481679:1 // ensembl_prediction // 10 // --- /// ENSANGT00000023879 // cdna:known chromosome:AgamP3:2L:27479714:27481679:1 g
| | | | | | | | | | | |
ANOXCEL ANNOTATION
| Seq name
| AGAP006167-PA
| First residue
| M
| Description
| pep:known chromosome:AgamP3:2L:27479714:27481679:1 gene:AGAP006167 transcript:AGAP006167-RA
| CDS name and link to nucleotide data
| AGAP006167-RA
| Description
| cdna:known chromosome:AgamP3:2L:27479714:27481679:1 gene:AGAP006167
| ATG?
| ATG
| Stop?
| *
| Best match to AG-CDS
| AGAP006167-RA
| E value
| 0
| Score
| 828
| Extent of match
| 405
| Length of best match
| 1218
| % identity
| 100
| % Match length
| 33
| First residue of match - UTR overhang
| 1
| First residue of sequence
| 1
| Link to whole gene + 2000nt 5' + 200nt 3'
| AGAP006167-PA
| Link to 5' 2,000 nt
| AGAP006167-PA
| Link to 3' 200 nt
| AGAP006167-PA
| Gene name and view at Ensembl
| AGAP006167
| Protein view at Ensembl
| AGAP006167-PA
| Chromosome
| 2L
| For or Rev
| F
| Location
| join(27479714..27480058,27480124..27480617,27481238..27481556,27481620..27481679)
| Exon locations
| 27479714-27480058 27480124-27480617 27481238-27481556 27481620-27481679
| Number of introns and link to fasta file
| 3
| intron lengths
| 66 621 64
| Start
| 27479714
| End
| 27481679
| Gene length
| 1965
| Protein size
| 405
| Complexity index
| 0.3
| Cys number
| 10
| SigP Result
| ANC
| MW
| 46.125
| pI
| 8.01
| TMHMM result
| ExpAA=111.64 First60=19.39 PredHel=4 Topology=o42-61i138-160o195-217i282-304o
| Predicted helices
| 4
| % membrane
| 21
| % outside
| 44
| % inside
| 35.1
| Best match to NR protein database
| Odorant receptor 8
| E value
| 5E-060
| Match
| gi|108868421
| Score
| 234
| Extent of match
| 426
| Length of best match
| 406
| % identity
| 33
| % Match length
| 105
| First residue of match
| 5
| First residue of sequence
| 4
| Number of segments
| 1
| Species
| Aedes aegypti
| Key words
| ODORANT RECEPTOR 85C AEDES AEGYPTI CHEMOSENSORY 12 HELIOTHIS VIRESCENS 7 CANDIDATE OLFACTORY BOMBYX MORI >GI SIMILAR TO 13A APIS MELLIFERA 67C DROSOPHILA MELANOGASTER OR67C_DROME 85D Q9VHQ2 OR85D_DROME 85B Q9VHQ7 OR85B_DROME PSEUDOOBSCURA SECHELLIA 9 30A 92A Q9VDM1 OR92A_DROME Q9VXL0 OR13A_DROME RECEPTOR-5 5
| Best match to SWISSP database
| Putative odorant receptor 67c - Drosophila melanogaster (Fruit fly)
| E value
| 4E-016
| Match
| Q9VT90|OR67C_DROME
| Score
| 85.5
| Extent of match
| 376
| Length of best match
| 404
| % identity
| 22
| % Match length
| 93
| First residue of match
| 50
| First residue of sequence
| 41
| Number of segments
| 1
| PROSITE motifs
| PKC_PHOSPHO_SITE |CK2_PHOSPHO_SITE |TYR_PHOSPHO_SITE |MYRISTYL |PRENYLATION |ER_TARGET |MICROBODIES_CTER |
| Non promiscuous prosite motifs
| ER_TARGET |
| Best match to GO database
|
| E value
|
| Function descriptors
|
| Component descriptors
|
| Process descriptors
|
| Best match to KOG database
|
| E value
|
| Best match to PFAM database
| 7tm_6
| E value
| 6E-024
| Best match to AEGY-PEP database
| Odorant receptor 8
| E value
| 3e-62
| Match
| AAEL015147-RA
| Score
| 234
| Extent of match
| 426
| Length of best match
| 406
| % identity
| 33
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
