| Probeset ID
| Ag.2L.1011.0_CDS_at
| Current gene ID
| AGAP006799
| Affymetrix transcript data
| ENSANGT00000013242 /FEA=ENS /TIER=CDS /ANNOT=ENSANGT00000013242 /EVID_CNT=4 /EVID_TYPE=ENS EST /GENE_CLUSTER=AffxAg.1011 /SEG=chr2L:-38012605,38013427
| | |
| STAGE
| SIGNAL MEAN
| STD DEV
| L
| 479.87
| 28.71
| M
| 331.63
| 24.99
| NBF
| 463.2
| 54.25
| BF3h
| 366.83
| 36.6
| BF24h
| 383.2
| 32.78
| BF48h
| 562.6
| 43.14
| BF72h
| 494.5
| 23
| BF96h
| 389.8
| 14.3
| BF15d
| 404.9
| 24.87
| | | | | | | | | | |
|
| TISSUE
| SIGNAL MEAN
| STD DEV
| Fat bodies
| 312.43
| 48.57
| Midgut
| 371.07
| 25.74
| Ovaries
| 720.87
| 125.49
| | | |
|
| 
|
AFFYMETRIX ANNOTATION
| Probeset ID
| Ag.2L.1011.0_CDS_at
| Annotation Date
| 3/8/2007
| Target Description
| ens:ENSANGT00000013242 /FEA=ENS /TIER=CDS /ANNOT=ens:ENSANGT00000013242 /EVID_CNT=4 /EVID_TYPE=ENS EST /GENE_CLUSTER=AffxAg.1011 /SEG=chr2L:-38012605,38013427
| Genome Version
| February 2003 (IAGP v.MOZ2)
| Alignments
| chr2L:38012605-38013427 (-) // 100.0 //
| Ensembl
| ENSANGG00000010753
| Annotation Description
| This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A
| Annotation Transcript Cluster
| XM_308947(11)
| Transcript Assignments
| ENSANGESTT00000009787 // --- // ensembl_est // 11 // --- /// ENSANGT00000013242 // cdna:novel chromosome:AgamP3:2L:38581845:38582666:-1 gene:ENSANGG00000010753 // ensembl_transcript // 11 // --- /// XM_308947 // Anopheles gambiae str. PEST ENSANGP00000013
| Annotation Notes
| SNAP_ANOPHELES00000003113 // ensembl_prediction // 8 // Cross Hyb Matching Probes
| | | | | | | | | | |
ANOXCEL ANNOTATION
| Seq name
| AGAP006799-PA
| First residue
| M
| Description
| pep:novel chromosome:AgamP3:2L:38581845:38582666:-1 gene:AGAP006799 transcript:AGAP006799-RA
| CDS name and link to nucleotide data
| AGAP006799-RA
| Description
| cdna:novel chromosome:AgamP3:2L:38581845:38582666:-1 gene:AGAP006799
| Best match to AG-CDS
| AGAP006799-RA
| E value
| 4e-96
| Score
| 345
| Extent of match
| 165
| Length of best match
| 655
| % identity
| 100
| % Match length
| 25
| First residue of match - UTR overhang
| 89
| First residue of sequence
| 1
| Link to whole gene + 2000nt 5' + 200nt 3'
| AGAP006799-PA
| Link to 5' 2,000 nt
| AGAP006799-PA
| Link to 3' 200 nt
| AGAP006799-PA
| Gene name and view at Ensembl
| AGAP006799
| Protein view at Ensembl
| AGAP006799-PA
| Chromosome
| 2L
| For or Rev
| R
| Location
| join(complement(38582485..38582578),complement(38582344..38582395),complement(38581914..38582265))
| Exon locations
| 38582485-38582578 38582344-38582395 38581914-38582265
| Number of introns and link to fasta file
| 2
| intron lengths
| 90 79
| Start
| 38581914
| End
| 38582578
| Gene length
| 664
| Protein size
| 165
| Complexity index
| 0.27
| Cys number
| 5
| SigP Result
| CYT
| MW
| 19.024
| pI
| 5.45
| TMHMM result
| ExpAA=0.00 First60=0.00 PredHel=0 Topology=o
| Predicted helices
| 0
| Best match to NR protein database
| adrenodoxin
| E value
| 4E-072
| Match
| gi|108874701
| Score
| 272
| Extent of match
| 165
| Length of best match
| 165
| % identity
| 78
| % Match length
| 100
| First residue of match
| 1
| First residue of sequence
| 1
| Number of segments
| 1
| Species
| Aedes aegypti
| Key words
| ADRENODOXIN AEDES AEGYPTI FERREDOXIN CG4205-PA DROSOPHILA MELANOGASTER >GI ADXH_DROME ADRENODOXIN-LIKE MITOCHONDRIAL PRECURSOR LIKE PSEUDOOBSCURA SIMILAR TO MELLIFERA TRIBOLIUM CASTANEUM HYPOTHETICAL CAENORHABDITIS BRIGGSAE ELEGANS MUSCULUS UNNAMED PRODUCT MUS RATTUS NORVEGICUS DANIO RERIO CANIS FAMILIARIS TAURUS ISOFORM 3 PAN TROGLODYTES 1 HOMO SAPIENS RIKEN CDNA 2 XENOPUS LAEVIS MONODELPHIS DOMESTICA SJCHGC03330 SCHISTOSOMA JAPONICUM DIGITALIS LANATA MACACA MULATTA MEDICAGO TRUNCATULA
| Best match to SWISSP database
| Adrenodoxin-like prote
| E value
| 8E-065
| Match
| P37193|ADXH_DROME
| Score
| 244
| Extent of match
| 143
| Length of best match
| 172
| % identity
| 78
| % Match length
| 83
| First residue of match
| 30
| First residue of sequence
| 24
| Number of segments
| 1
| PROSITE motifs
| ASN_GLYCOSYLATION |PKC_PHOSPHO_SITE |CK2_PHOSPHO_SITE |TYR_PHOSPHO_SITE |MYRISTYL |PRENYLATION |MICROBODIES_CTER |ADX |
| Non promiscuous prosite motifs
| ADX |
| Best match to GO database
| Ferredoxin - Drosophila melanogaster - electron carrier activity
| E value
| E-6
| Function descriptors
| electron carrier activity||oxidoreductase activity||catalytic activity
| Function parent
| catalytic activity
| Function second parent
| oxidoreductase activity
| GO #
| GO:0009055
| E value of functional GO
| 3e-27
| Component descriptors
| mitochondrial inner membrane||integral to mitochondrial outer membrane||intrinsic to mitochondrial outer membrane||mitochondrial membrane part||mitochondrial part||nuclear cyclin-dependent protein kinase holoenzyme complex||cyclin-dependent protein kinase holoenzyme complex||prospore||immature spore
| Component parent
| immature spore
| Component second parent
| prospore
| GO #
| GO:0005743
| E value of component GO
| 3e-27
| Process descriptors
| cytochrome c oxidase complex assembly||protein complex assembly||protein metabolism||macromolecule metabolism||metabolism
| Process parent
| catalytic activity
| Process second parent
| oxidoreductase activity
| GO #
| GO:0008535
| E value of process GO
| 3e-27
| Best match to KOG database
| Ferredoxin
| E value
| 3E-049
| General class
| Energy production and conversion
| Best match to PFAM database
| Fer2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
