| Probeset ID
| Ag.2L.1026.0_CDS_at
| Current gene ID
| AGAP007589
| Affymetrix transcript data
| ENSANGT00000010828 /FEA=ENS /TIER=CDS /ANNOT=ENSANGT00000010828 /EVID_CNT=4 /EVID_TYPE=ENS EST /GENE_CLUSTER=AffxAg.1026 /SEG=chr2L:-47463967,47465796
| | |
| STAGE
| SIGNAL MEAN
| STD DEV
| L
| 760.67
| 70.44
| M
| 1230.07
| 42.33
| NBF
| 1202.33
| 57.93
| BF3h
| 1648.57
| 40.45
| BF24h
| 623
| 74.07
| BF48h
| 543.83
| 46.36
| BF72h
| 323.1
| 16.48
| BF96h
| 849.83
| 141.63
| BF15d
| 985.83
| 24.91
| | | | | | | | | | |
|
| TISSUE
| SIGNAL MEAN
| STD DEV
| Fat bodies
| 1217.37
| 168.48
| Midgut
| 2999.33
| 146.96
| Ovaries
| 215.93
| 60.83
| | | |
|
| 
|
AFFYMETRIX ANNOTATION
| Probeset ID
| Ag.2L.1026.0_CDS_at
| Annotation Date
| 3/8/2007
| Target Description
| ens:ENSANGT00000010828 /FEA=ENS /TIER=CDS /ANNOT=ens:ENSANGT00000010828 /EVID_CNT=4 /EVID_TYPE=ENS EST /GENE_CLUSTER=AffxAg.1026 /SEG=chr2L:-47463967,47465796
| Genome Version
| February 2003 (IAGP v.MOZ2)
| Alignments
| chr2L:47463967-47465796 (-) // 100.0 //
| InterPro
| IPR007235 // Glycosyltransferase 28, C-terminal // 1.8E-4
| Annotation Description
| This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 1 transcripts. // false // Matching Probes // A
| Annotation Transcript Cluster
| XM_308284(11)
| Transcript Assignments
| SNAP_ANOPHELES00000015324 // cdna:SNAP chromosome:AgamP3:2L:48030467:48034927:-1 // ensembl_prediction // 10 // --- /// XM_308284 // Anopheles gambiae str. PEST ENSANGP00000010828 (ENSANGG00000008339), partial mRNA. // refseq // 11 // ---
| Annotation Notes
| ENSANGT00000010828 // ensembl_transcript // 1 // Cross Hyb Matching Probes
| | | | | | | | | | |
ANOXCEL ANNOTATION
| Seq name
| AGAP007589-PA
| First residue
| M
| Description
| pep:novel chromosome:AgamP3:2L:48033195:48035035:-1 gene:AGAP007589 transcript:AGAP007589-RA
| CDS name and link to nucleotide data
| AGAP007589-RA
| Description
| cdna:novel chromosome:AgamP3:2L:48033195:48035035:-1 gene:AGAP007589
| Stop?
| *
| Best match to AG-CDS
| AGAP007589-RA
| E value
| 0
| Score
| 1066
| Extent of match
| 533
| Length of best match
| 1686
| % identity
| 100
| % Match length
| 32
| First residue of match - UTR overhang
| 85
| First residue of sequence
| 1
| Link to whole gene + 2000nt 5' + 200nt 3'
| AGAP007589-PA
| Link to 5' 2,000 nt
| AGAP007589-PA
| Link to 3' 200 nt
| AGAP007589-PA
| Gene name and view at Ensembl
| AGAP007589
| Protein view at Ensembl
| AGAP007589-PA
| Chromosome
| 2L
| For or Rev
| R
| Location
| join(complement(48034763..48034951),complement(48034186..48034679),complement(48033195..48034113))
| Exon locations
| 48034763-48034951 48034186-48034679 48033195-48034113
| Number of introns and link to fasta file
| 2
| intron lengths
| 84 73
| Start
| 48033195
| End
| 48034951
| Gene length
| 1756
| Protein size
| 533
| Complexity index
| 0.2
| Cys number
| 2
| SigP Result
| SIG
| Cleavage Position
| 32-33
| MW
| 59.54
| pI
| 9.32
| Mature MW
| 56.027
| pI
| 9.21
| TMHMM result
| ExpAA=44.46 First60=18.60 PredHel=2 Topology=i12-30o485-507i
| Predicted helices
| 2
| % membrane
| 7.5
| % outside
| 85.4
| % inside
| 7.1
| Best match to NR protein database
| glucosyl/glucuronosyl transferases [Aedes aegypti]
| E value
| 0.0
| Match
| gi|108883113
| Score
| 674
| Extent of match
| 527
| Length of best match
| 525
| % identity
| 62
| % Match length
| 100
| First residue of match
| 3
| First residue of sequence
| 10
| Number of segments
| 1
| Species
| Aedes aegypti
| Key words
| GLUCOSYL GLUCURONOSYL TRANSFERASES AEDES AEGYPTI >GI SIMILAR TO TRIBOLIUM CASTANEUM DROSOPHILA PSEUDOOBSCURA MELANOGASTER UGT36BA UGT36BC ISOFORM A UDP-GLYCOSYLTRANSFERASE 35B CG6649-PA GLYCOSYLTRANSFERASE ANTENNAL-ENRICHED ANTENNAL ENRICHED UDP
| Best match to SWISSP database
| 2-hydroxyacylsphingosine 1-beta-galactosyltransferase precursor (EC 2.4.1.45)
| E value
| 2E-057
| Match
| Q09426|CGT_RAT
| Score
| 223
| Extent of match
| 507
| Length of best match
| 541
| % identity
| 30
| % Match length
| 94
| First residue of match
| 15
| First residue of sequence
| 27
| Number of segments
| 1
| PROSITE motifs
| ASN_GLYCOSYLATION |PKC_PHOSPHO_SITE |CK2_PHOSPHO_SITE |TYR_PHOSPHO_SITE |MYRISTYL |AMIDATION |MICROBODIES_CTER |UDPGT |
| Non promiscuous prosite motifs
| UDPGT |
| Best match to GO database
| UDP galactosyltransferase 8A - Mus musculus - extracellular space - integral to membrane - ceramide glucosyltransferase activity - glycolipid biosynthetic process - myelination
| E value
| E-5
| Function descriptors
| ceramide glucosyltransferase activity||UDP-glucosyltransferase activity||glucosyltransferase activity||transferase activity\, transferring hexosyl groups||transferase activity\, transferring glycosyl groups||transferase activity||catalytic activity
| Function parent
| catalytic activity
| Function second parent
| transferase activity
| GO #
| GO:0008120
| E value of functional GO
| 2e-57
| Component descriptors
| extracellular space||tectum||extracellular matrix part
| Component parent
| extracellular matrix part
| Component second parent
| tectum
| GO #
| GO:0005615
| E value of component GO
| 2e-57
| Process descriptors
| glycolipid biosynthesis||membrane lipid biosynthesis||membrane lipid metabolism||cellular lipid metabolism||cellular metabolism||cellular physiological process
| Process parent
| catalytic activity
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
